BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C07LP1|AL428189
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1961 0.0
3x_Contig943 252 9e-67
3x_Contig1755 177 5e-44
3x_Contig1465 129 1e-29
>3x_Contig1682
Length = 16889
Score = 1961 bits (988), Expect = 0.0
Identities = 992/994 (99%)
Strand = Plus / Plus
Query: 1 ggaattttctagaatgaaatagtatacaaatttttcgctcgagaaagtgaaaaagtgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 ggaattttctagaatgaaatagtatacaaatttttcgctcgagaaagtgaaaaagtgttg 94
Query: 61 acatactgcactggaggcaaagaggatggacaaagtaacactggaatagaattatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 acatactgcactggaggcaaagaggatggacaaagtaacactggaatagaattatataaa 154
Query: 121 aagagacagattcagtgaactttgaaagaatgtttcttggaaggttatcgttactacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aagagacagattcagtgaactttgaaagaatgtttcttggaaggttatcgttactacttt 214
Query: 181 cttcaattaatacccaattagtttagtaagtgatatatatttgtcattttctcaatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cttcaattaatacccaattagtttagtaagtgatatatatttgtcattttctcaatttca 274
Query: 241 gaaaattgagacgctagttagttagttaggattgatttacaaaggataatattatactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaaaattgagacgctagttagttagttaggattgatttacaaaggataatattatactcc 334
Query: 301 taatttcctaaaccatctatcttccattatatctctattctgttctgaatatcttttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taatttcctaaaccatctatcttccattatatctctattctgttctgaatatcttttata 394
Query: 361 aagttttaaaaacttaagaagacttcaattaattttacaggaaaccccacattatcaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aagttttaaaaacttaagaagacttcaattaattttacaggaaaccccacattatcaaat 454
Query: 421 aacatacaaacgaaattataatgtctaaggctgttggtattgatttgggtaccacttact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aacatacaaacgaaattataatgtctaaggctgttggtattgatttgggtaccacttact 514
Query: 481 catgtgttgctcacttttctaacgaccgtgtcgaaattttggctaacgaccaaggtaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 catgtgttgctcacttttctaacgaccgtgtcgaaattttggctaacgaccaaggtaaca 574
Query: 541 gaactaccccatcttttgtcgctttcaccgacactgaaagattgattggtgatgctgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gaactaccccatcttttgtcgctttcaccgacactgaaagattgattggtgatgctgcca 634
Query: 601 agaaccaagctgctatgaacccagccaacactgttttcgatgctaagcgtttgattggta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agaaccaagctgctatgaacccagccaacactgttttcgatgctaagcgtttgattggta 694
Query: 661 gaaacttcagtgacgcagaagttcaaggtgatatcaagcacttcccattcaaggtcattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaaacttcagtgacgcagaagttcaaggtgatatcaagcacttcccattcaaggtcattg 754
Query: 721 acgttgctggtaagccacaagtcgaagtcgaatacaagggtgaaaacaaggttttcaccc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 acgttgctggtaagccacaagtcgaagtcgaatacaagggtgaaaacaaggttttcaccc 814
Query: 781 cagaagaaatctcctctatgattttgagtkagatgaaggaaactgctgaatcttacttgg 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 815 cagaagaaatctcctctatgattttgagtaagatgaaggaaactgctgaatcttacttgg 874
Query: 841 gttgcaaggttaacgacgctgtcgttaccgttccagcttactttaacgattctcaaagac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gttgcaaggttaacgacgctgtcgttaccgttccagcttactttaacgattctcaaagac 934
Query: 901 aagctaccaaggatgctggtaccattgctggtttgaacgttctaagaatcattaacgaac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aagctaccaaggatgctggtaccattgctggtttgaacgttctaagaatcattaacgaac 994
Query: 961 ctaccgctgctgccattgcttacggtttkgacaa 994
|||||||||||||||||||||||||||| |||||
Sbjct: 995 ctaccgctgctgccattgcttacggtttggacaa 1028
>3x_Contig943
Length = 2708
Score = 252 bits (127), Expect = 9e-67
Identities = 214/243 (88%)
Strand = Plus / Plus
Query: 744 gaagtcgaatacaagggtgaaaacaaggttttcaccccagaagaaatctcctctatgatt 803
||||| |||||||||||||||| || || |||| ||||||||||| || |||||| |
Sbjct: 452 gaagttgaatacaagggtgaaactaaagtgttcagtccagaagaaatttcttctatggtc 511
Query: 804 ttgagtkagatgaaggaaactgctgaatcttacttgggttgcaaggttaacgacgctgtc 863
|| ||| ||||||||||||| |||||| ||||||| ||| ||| ||||| ||||||||
Sbjct: 512 ttaagtaagatgaaggaaaccgctgaagcttacttaggtaccaaagttaatgacgctgtt 571
Query: 864 gttaccgttccagcttactttaacgattctcaaagacaagctaccaaggatgctggtacc 923
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gttaccgttccagcttatttcaacgattctcaaagacaagctaccaaggatgctggtacc 631
Query: 924 attgctggtttgaacgttctaagaatcattaacgaacctaccgctgctgccattgcttac 983
||||||||||||||||| | ||||| |||||||||||||| |||||||||||||| |||
Sbjct: 632 attgctggtttgaacgtcttgagaattattaacgaacctactgctgctgccattgcgtac 691
Query: 984 ggt 986
|||
Sbjct: 692 ggt 694
Score = 181 bits (91), Expect = 3e-45
Identities = 187/219 (85%)
Strand = Plus / Plus
Query: 441 atgtctaaggctgttggtattgatttgggtaccacttactcatgtgttgctcacttttct 500
||||| || ||||||||||||||||| ||||| ||||| || |||||||| || || |
Sbjct: 149 atgtcaaaagctgttggtattgatttaggtactacttattcgtgtgttgcacatttcacc 208
Query: 501 aacgaccgtgtcgaaattttggctaacgaccaaggtaacagaactaccccatcttttgtc 560
||||| ||||| |||||| | || ||||| |||||||| ||||| || ||||||| ||
Sbjct: 209 aacgatcgtgtggaaattattgccaacgatcaaggtaatagaacaactccatcttacgtt 268
Query: 561 gctttcaccgacactgaaagattgattggtgatgctgccaagaaccaagctgctatgaac 620
|| || ||||| || |||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 269 gcctttaccgatacagaaagattgattggtgatgcagcaaagaaccaagctgctatcaac 328
Query: 621 ccagccaacactgttttcgatgctaagcgtttgattggt 659
||| | |||||||||||||||||||||||||||||||||
Sbjct: 329 ccatcaaacactgttttcgatgctaagcgtttgattggt 367
>3x_Contig1755
Length = 22936
Score = 177 bits (89), Expect = 5e-44
Identities = 119/129 (92%)
Strand = Plus / Minus
Query: 858 gctgtcgttaccgttccagcttactttaacgattctcaaagacaagctaccaaggatgct 917
|||||||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 16597 gctgtcgttaccgtcccagcttacttcaacgatgctcaaagacaagccaccaaggatgct 16538
Query: 918 ggtaccattgctggtttgaacgttctaagaatcattaacgaacctaccgctgctgccatt 977
||| ||||||||||||||||||| | ||||||||||||||||| || ||||||||||||
Sbjct: 16537 ggtgccattgctggtttgaacgtcttgagaatcattaacgaaccaactgctgctgccatt 16478
Query: 978 gcttacggt 986
|||||||||
Sbjct: 16477 gcttacggt 16469
Score = 103 bits (52), Expect = 6e-22
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 576 gaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagccaacactgtt 635
||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 16879 gaaagattgatcggtgatgctgctaagaaccaagctgctttgaacccaaaaaacaccgtc 16820
Query: 636 ttcgatgctaagcgtttgattggtagaa 663
||||||||||||||||| ||||||||||
Sbjct: 16819 ttcgatgctaagcgtttaattggtagaa 16792
>3x_Contig1465
Length = 9847
Score = 129 bits (65), Expect = 1e-29
Identities = 101/113 (89%)
Strand = Plus / Plus
Query: 876 gcttactttaacgattctcaaagacaagctaccaaggatgctggtaccattgctggtttg 935
||||||||||||||| ||||||||||||| || ||||| || ||| ||||||||||||||
Sbjct: 3795 gcttactttaacgatgctcaaagacaagccactaaggacgcaggtgccattgctggtttg 3854
Query: 936 aacgttctaagaatcattaacgaacctaccgctgctgccattgcttacggttt 988
||| || | |||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 3855 aacattttgagaatcgttaacgaacctaccgctgcagccattgcttatggttt 3907
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8350
Number of Sequences: 1807
Number of extensions: 8350
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 4
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)